2008

1. Genomic Sequence Is Highly Predictive of Local Nucleosome Depletion

PLoS Comput Biol. January; 4(1): e13. Joint with Guocheng Yuan. The algorithm is available here.

2. Systematic Analysis of Pleiotropy in C. elegans Early Embryogenes

PLoS Comput Biol, January; 4(2): e1000003 doi:10.1371/journal.pcbi.1000003. Joint with Zou L et al.

3. Bayesian clustering of transcription factor binding motifs.

J. Amer Statist Assoc, 103, 188-200. Joint with Shane Jensen.

4. Bayesian biclustering of gene expression data.

BMC Genomics, 9 (Suppl 1):S4, joint with Jiajun Gu.

5. Extracting Sequence Features to Predict Protein-DNA Interactions: A Comparative Study.

Nuc Acid Res, 36 (12), 4137-4148. Joint with Qing Zhou.